Download e-book for kindle: Advances in Computational Biology by Hugo O. Villar (Eds.)

By Hugo O. Villar (Eds.)

ISBN-10: 1559389796

ISBN-13: 9781559389792

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Extra resources for Advances in Computational Biology

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0 • ^0 "-o *• 1 * ° \ *:'••• • 1 •"""' y' 1 e »*• * ° °°° '••»•'•* °°° 0 '[y °° • 1 1 I, * * * . '- 48 52 56 60 64^ 68 area per molecule (A ) Figure 4. F(Tm{L)), for the mismatch model, Eq. (3), of the main transition in DPPC lipid bilayers as a function of average molecular area. A, shown for three different values of the mismatch parameter, TA, and for different linear lattice dimensions, L (a) FA = 3 x 10~^^ erg/A and Z. = 8,16, 24 (from bottom to top), 16 (b) FA = 4 X 1 0"^^ erg/A and Z.

B) Phase diagram. , 1995). The size dependence of the compositional distribution function is displayed in Figure 7(a). The family of distribution functions is shown at the appropriate size-dependent chemical-potential values corresponding to phase coexistence. It is seen that, as the system size is increased, there is a dramatic increase in the free energy barrier between the two phases and that the composition of the mixture at the given thermodynamic conditions is given by J^SPC "= ^-^^ ^ ^ ^spc ~ ^•^^- ^^^ ^^ unambiguous evidence of phase coexistence in the thermodynamic limit and that the interfacial tension tends towards a nonzero value; cf.

For the short protein, the decay length is very large in the transition region, up to about seven molecular layers at T^. Far away from T^, the decay length in all cases is very short, less than one molecular distance, in accordance with the vanishing lipid-lipid density fluctuations. , Up within the present model). This is demonstrated in Figure 12(d) by data which refer to a single-site protein (/ip = 1), a seven-site protein (np = 7), and a protein wall (/jp = oo) for dp = 32 A. It is seen that the correlation length increases as the protein size is increased.

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Advances in Computational Biology by Hugo O. Villar (Eds.)


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