Download e-book for kindle: Bioinformatics: From Nucleic Acids and Proteins to Cell by Dietmar Schomburg, Uta Lessel

By Dietmar Schomburg, Uta Lessel

ISBN-10: 3527300724

ISBN-13: 9783527300723

Bioinformatics, during this context the appliance of laptop technological know-how to organic difficulties, has turn into an necessary a part of any study within the biosciences. swift advancements in gene sequencing, constitution decision in addition to rational protein engineering and layout have made it useful for biologists, chemists, and desktop scientists to channel their services into huge scale collaborative initiatives. This GBF Monograph provides a basic evaluate of the most recent flexible actions in bioinformatics: * organic facts Bases * DNA and RNA * Protein Sequences and constructions * From Molecules to mobile Metabolism The articles were chosen from contributions to a convention on Bioinformatics/Computer program within the Biosciences, held in October 1995 in Braunschweig on the German nationwide learn middle for Biotechnology.

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0. Schmitt, W. Ebeling, and H. Herzel, The Modular Structure of Informational Sequences, BioSystems, in press. [56] T. Lindahl, Nature 362, 709 (1993). [57] S. Brunak, J. Engelbrecht, and S. Knudsen, J. Mol. Biol. 220, 49 (1991). [58] R. N. Mantegna, S. V. Buldyrev, A. L. Goldberger, S. -K. Peng, M. Simons, and H. E. Stanley, Phys. Rev. Lett. 73, 3169 (1994). [59] W. Ebeling and M. A. Jimenez-Montano, Math. Biosc. 52, 5371 (1980). Bioinformatics: From NudeicAcids and Proteinsb Cell Metabolism Edited by Dietmar Schomburg, Uta Lessel Q GEF (Gesellschait for BiotechnologischeForschung mbH), 1995 A Consensus Match Scoring System that is Correlated with Biological Functionality Kerstin Quandt, Kornelie Frech, Giinter Herrmann' and Thomas Werner Institut fur Saugetiergenetik, 'Institut fur Medizinische Informatik und Systemforschung, GSF-Forschungszentrumfiir Umwelt und Gesundheit GmbH, Ingolsttidter LandstraSe 1, D-85758OberschleiBheim Summary The Ci-scoring system is suitable for the identification of putative functional transcription factor binding sites solely by sequence analysis.

501 M. C. Mackey, Rev. Mod. Phys. 61, 981 (1989). [51] T. Ikemura, J. Mol. Biol. 146, 1 (1981). [52] A. Lapedes, C. Barnes, C. Burks, R. Farber, and K. Sirotkin, in Computers and DNA, eds. G. Bell and T. Marr (Addison-Wesley, Reading, 1990). [53] E. C. Uberbacher and R. Mural, Proc. Natl. Acad. Sci. USA 88, 11261 (1991). [54] S. G. , Nature 357, 38 (1992). [55] A. 0. Schmitt, W. Ebeling, and H. Herzel, The Modular Structure of Informational Sequences, BioSystems, in press. [56] T. Lindahl, Nature 362, 709 (1993).

Chapter 2 introduces the abstract model of molecular evolution used in this study. 2). 3) which provides space reduction and makes further processing feasible. 4). 5). Chapter 4 concludes with a few observation drawn from our computational experiment. The Sequence Class GC30 and its Neutral Networks 2 For mathematical as well as for computational treatment, our model of evolutionary processes must be reduced to its minimal essence. While the mathematical model can treat alphabet size and sequence length as parameters, a computational approach will also have to restrict these parameters severely.

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Bioinformatics: From Nucleic Acids and Proteins to Cell Metabolism by Dietmar Schomburg, Uta Lessel

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